=> Bootstrap dependency digest>=20211023: found digest-20220214
=> Checksum BLAKE2s OK for MACS2-2.2.9.1.tar.gz
=> Checksum SHA512 OK for MACS2-2.2.9.1.tar.gz
===> Installing dependencies for py311-macs2-2.2.9.1
==========================================================================
The following variables will affect the build process of this package,
py311-macs2-2.2.9.1.  Their current value is shown below:

        * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp
        * PYTHON_VERSION_DEFAULT = 312

Based on these variables, the following variables have been set:

        * BLAS_INCLUDES = -I/usr/pkg/include/netlib
        * BLAS_LIBS = -lblas
        * BLAS_PC = blas
        * BLAS_TYPE = netlib
        * CBLAS_LIBS = -lcblas -lblas
        * CBLAS_PC = cblas
        * LAPACKE_LIBS = -llapacke -llapack -lblas
        * LAPACKE_PC = lapacke
        * LAPACK_LIBS = -llapack -lblas
        * LAPACK_PC = lapack
        * PYPACKAGE = python311

You may want to abort the process now with CTRL-C and change the value
of variables in the first group before continuing.  Be sure to run
`/usr/bin/make clean' after the changes.
==========================================================================
=> Tool dependency py311-cython-[0-9]*: found py311-cython-3.0.11
=> Tool dependency py311-setuptools-[0-9]*: found py311-setuptools-74.1.2
=> Tool dependency py311-wheel-[0-9]*: found py311-wheel-0.44.0
=> Tool dependency py311-build>=0: found py311-build-1.2.2
=> Tool dependency py311-installer>=0.7.0nb1: found py311-installer-0.7.0nb1
=> Tool dependency mktools-[0-9]*: found mktools-20220614
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Full dependency python311>=3.11.0: found python311-3.11.10
=> Full dependency py311-numpy>=1.20.3nb1: found py311-numpy-2.1.1
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Overriding tools for py311-macs2-2.2.9.1
===> Extracting for py311-macs2-2.2.9.1
===> Patching for py311-macs2-2.2.9.1
=> Applying pkgsrc patches for py311-macs2-2.2.9.1
===> Creating toolchain wrappers for py311-macs2-2.2.9.1
===> Configuring for py311-macs2-2.2.9.1
mv -f /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/cPosValCalculation.c /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1
/bin/rm -f /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*.c /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*/*.c
cd /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1 && /usr/pkg/bin/cythonize-3.11 /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*.pyx
Python path configuration:
  PYTHONHOME = (not set)
  PYTHONPATH = (not set)
  program name = '/usr/pkg/bin/python3.11'
  isolated = 0
  environment = 1
  user site = 1
  safe_path = 0
  import site = 1
  is in build tree = 0
  stdlib dir = '/usr/pkg/lib/python3.11'
  sys._base_executable = '/usr/pkg/bin/python3.11'
  sys.base_prefix = '/usr/pkg'
  sys.base_exec_prefix = '/usr/pkg'
  sys.platlibdir = 'lib'
  sys.executable = '/usr/pkg/bin/python3.11'
  sys.prefix = '/usr/pkg'
  sys.exec_prefix = '/usr/pkg'
  sys.path = [
    '/usr/pkg/lib/python311.zip',
    '/usr/pkg/lib/python3.11',
    '/usr/pkg/lib/python3.11/lib-dynload',
  ]
Fatal Python error: init_fs_encoding: failed to get the Python codec of the filesystem encoding
Python runtime state: core initialized
ModuleNotFoundError: No module named 'encodings'

Current thread 0xf519dc00 (most recent call first):
  <no Python frame>
*** Error code 1

Stop.
make[1]: stopped in /usr/pkgsrc/biology/py-macs2
*** Error code 1

Stop.
make: stopped in /usr/pkgsrc/biology/py-macs2