=> Bootstrap dependency digest>=20211023: found digest-20220214
=> Checksum BLAKE2s OK for MACS2-2.2.9.1.tar.gz
=> Checksum SHA512 OK for MACS2-2.2.9.1.tar.gz
===> Installing dependencies for py39-macs2-2.2.9.1
==========================================================================
The following variables will affect the build process of this package,
py39-macs2-2.2.9.1.  Their current value is shown below:

        * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp
        * PYTHON_VERSION_DEFAULT = 311

Based on these variables, the following variables have been set:

        * BLAS_INCLUDES = -I/usr/pkg/include/netlib
        * BLAS_LIBS = -lblas
        * BLAS_PC = blas
        * BLAS_TYPE = netlib
        * CBLAS_LIBS = -lcblas -lblas
        * CBLAS_PC = cblas
        * LAPACKE_LIBS = -llapacke -llapack -lblas
        * LAPACKE_PC = lapacke
        * LAPACK_LIBS = -llapack -lblas
        * LAPACK_PC = lapack
        * PYPACKAGE = python39

You may want to abort the process now with CTRL-C and change the value
of variables in the first group before continuing.  Be sure to run
`/usr/bin/make clean' after the changes.
==========================================================================
=> Tool dependency py39-cython-[0-9]*: found py39-cython-3.0.6
=> Tool dependency py39-build>=0: found py39-build-1.0.3nb1
=> Tool dependency py39-installer>=0.7.0nb1: found py39-installer-0.7.0nb1
=> Tool dependency mktools-[0-9]*: found mktools-20220614
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Full dependency python39>=3.9.0: found python39-3.9.18nb4
=> Full dependency py39-numpy>=1.20.3nb1: found py39-numpy-1.26.2nb1
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Overriding tools for py39-macs2-2.2.9.1
===> Extracting for py39-macs2-2.2.9.1
===> Patching for py39-macs2-2.2.9.1
=> Applying pkgsrc patches for py39-macs2-2.2.9.1
===> Creating toolchain wrappers for py39-macs2-2.2.9.1
===> Configuring for py39-macs2-2.2.9.1
mv -f /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/cPosValCalculation.c /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1
/bin/rm -f /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*.c /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*/*.c
cd /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1 && /usr/pkg/bin/cythonize-3.9 /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/PeakDetect.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/PeakDetect.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/PeakModel.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/PeakModel.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Pileup.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Pileup.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Prob.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Prob.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Signal.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Signal.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Statistics.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/Statistics.pyx
cd /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1 && /usr/pkg/bin/cythonize-3.9 /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/*/*.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/BedGraph.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/BedGraph.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/BedGraphIO.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/BedGraphIO.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/CallPeakUnit.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/CallPeakUnit.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/FixWidthTrack.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/FixWidthTrack.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/PairedEndTrack.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/PairedEndTrack.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/Parser.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/Parser.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/PeakIO.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/PeakIO.pyx
Compiling /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/ScoreTrack.pyx because it changed.
[1/1] Cythonizing /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2/IO/ScoreTrack.pyx
mv -f /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/cPosValCalculation.c /pbulk/work/biology/py-macs2/work/MACS-2.2.9.1/MACS2