=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Building for py310-xgboost-2.1.1
* Building wheel...
INFO:xgboost.packager.build_wheel:Parsed build configuration: {'hide_cxx_symbols': True, 'use_openmp': True, 'use_cuda': False, 'use_nccl': False, 'use_dlopen_nccl': False, 'plugin_federated': False, 'plugin_rmm': False, 'use_system_libxgboost': False}
INFO:xgboost.packager.build_wheel:Copying project files to temporary directory /tmp/tmpvk_ul1bt/whl_workspace
INFO:xgboost.packager.build_wheel:Copying /pbulk/work/math/py-xgboost/work/xgboost-2.1.1/pyproject.toml -> /tmp/tmpvk_ul1bt/whl_workspace/pyproject.toml
INFO:xgboost.packager.build_wheel:Copying /pbulk/work/math/py-xgboost/work/xgboost-2.1.1/hatch_build.py -> /tmp/tmpvk_ul1bt/whl_workspace/hatch_build.py
INFO:xgboost.packager.build_wheel:Copying /pbulk/work/math/py-xgboost/work/xgboost-2.1.1/README.rst -> /tmp/tmpvk_ul1bt/whl_workspace/README.rst
INFO:xgboost.packager.build_wheel:Copying /pbulk/work/math/py-xgboost/work/xgboost-2.1.1/xgboost -> /tmp/tmpvk_ul1bt/whl_workspace/xgboost
INFO:xgboost.packager.build_libxgboost:Building libxgboost.so from the C++ source files in /pbulk/work/math/py-xgboost/work/xgboost-2.1.1/cpp_src...
INFO:xgboost.packager.build_libxgboost:CMake args: ['cmake', '/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/cpp_src', '-GUnix Makefiles', '-DKEEP_BUILD_ARTIFACTS_IN_BINARY_DIR=ON', '-DHIDE_CXX_SYMBOLS=ON', '-DUSE_OPENMP=ON', '-DUSE_CUDA=OFF', '-DUSE_NCCL=OFF', '-DUSE_DLOPEN_NCCL=OFF', '-DPLUGIN_FEDERATED=OFF', '-DPLUGIN_RMM=OFF']
-- The CXX compiler identification is GNU 10.5.0
-- The C compiler identification is GNU 10.5.0
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /pbulk/work/math/py-xgboost/work/.cwrapper/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /pbulk/work/math/py-xgboost/work/.cwrapper/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- CMake version 3.30.2
-- Performing Test XGBOOST_MM_PREFETCH_PRESENT
-- Performing Test XGBOOST_MM_PREFETCH_PRESENT - Success
-- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT
-- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT - Success
-- xgboost VERSION: 2.1.1
-- Setting build type to 'Release' as none was specified.
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Looking for clock_gettime in rt
-- Looking for clock_gettime in rt - found
-- Looking for fopen64
-- Looking for fopen64 - not found
-- Looking for C++ include cxxabi.h
-- Looking for C++ include cxxabi.h - found
-- Looking for nanosleep
-- Looking for nanosleep - found
-- Looking for backtrace
-- Looking for backtrace - not found
-- Found Backtrace: /usr/lib/libexecinfo.so
-- /pbulk/work/math/py-xgboost/work/xgboost-2.1.1/cpp_src/dmlc-core/cmake/build_config.h.in -> include/dmlc/build_config.h
-- Performing Test SUPPORT_MSSE2
-- Performing Test SUPPORT_MSSE2 - Success
-- Configuring done (10.7s)
-- Generating done (0.2s)
-- Build files have been written to: /tmp/tmpvk_ul1bt/libbuild
[ 0%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/config.cc.o
[ 1%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/data.cc.o
[ 2%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io/filesys.cc.o
[ 5%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io.cc.o
[ 5%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/recordio.cc.o
[ 5%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io/line_split.cc.o
[ 8%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io/recordio_split.cc.o
[ 8%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io/indexed_recordio_split.cc.o
[ 8%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io/local_filesys.cc.o
[ 9%] Building CXX object dmlc-core/CMakeFiles/dmlc.dir/src/io/input_split_base.cc.o
sh: /usr/pkg/bin/cmake: not found
--- dmlc-core/libdmlc.a ---
*** [dmlc-core/libdmlc.a] Error code 127
make[2]: stopped in /tmp/tmpvk_ul1bt/libbuild
1 error
make[2]: stopped in /tmp/tmpvk_ul1bt/libbuild
--- dmlc-core/CMakeFiles/dmlc.dir/all ---
*** [dmlc-core/CMakeFiles/dmlc.dir/all] Error code 2
make[1]: stopped in /tmp/tmpvk_ul1bt/libbuild
1 error
make[1]: stopped in /tmp/tmpvk_ul1bt/libbuild
*** [all] Error code 2
make: stopped in /tmp/tmpvk_ul1bt/libbuild
1 error
make: stopped in /tmp/tmpvk_ul1bt/libbuild
INFO:xgboost.packager.build_libxgboost:Failed to build with OpenMP. Exception: Command '['make', '-j48']' returned non-zero exit status 2.
INFO:xgboost.packager.build_libxgboost:CMake args: ['cmake', '/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/cpp_src', '-GUnix Makefiles', '-DKEEP_BUILD_ARTIFACTS_IN_BINARY_DIR=ON', '-DHIDE_CXX_SYMBOLS=ON', '-DUSE_OPENMP=OFF', '-DUSE_CUDA=OFF', '-DUSE_NCCL=OFF', '-DUSE_DLOPEN_NCCL=OFF', '-DPLUGIN_FEDERATED=OFF', '-DPLUGIN_RMM=OFF']
Traceback (most recent call last):
File "/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/packager/nativelib.py", line 100, in build_libxgboost
_build(generator=generator)
File "/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/packager/nativelib.py", line 66, in _build
subprocess.check_call([build_tool, f"-j{nproc}"], cwd=build_dir)
File "/usr/pkg/lib/python3.10/subprocess.py", line 369, in check_call
subprocess.CalledProcessError: Command '['make', '-j48']' returned non-zero exit status 2.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/pkg/lib/python3.10/site-packages/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
File "/usr/pkg/lib/python3.10/site-packages/pyproject_hooks/_in_process/_in_process.py", line 335, in main
File "/usr/pkg/lib/python3.10/site-packages/pyproject_hooks/_in_process/_in_process.py", line 251, in build_wheel
File "/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/packager/pep517.py", line 80, in build_wheel
libxgboost = locate_or_build_libxgboost(
File "/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/packager/nativelib.py", line 171, in locate_or_build_libxgboost
return build_libxgboost(cpp_src_dir, build_dir=build_dir, build_config=build_config)
File "/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/packager/nativelib.py", line 104, in build_libxgboost
_build(generator=generator)
File "/pbulk/work/math/py-xgboost/work/xgboost-2.1.1/packager/nativelib.py", line 57, in _build
subprocess.check_call(cmake_cmd, cwd=build_dir)
File "/usr/pkg/lib/python3.10/subprocess.py", line 364, in check_call
File "/usr/pkg/lib/python3.10/subprocess.py", line 345, in call
File "/usr/pkg/lib/python3.10/subprocess.py", line 971, in __init__
File "/usr/pkg/lib/python3.10/subprocess.py", line 1863, in _execute_child
FileNotFoundError: [Errno 2] No such file or directory: 'cmake'
ERROR Backend subprocess exited when trying to invoke build_wheel
*** Error code 1
Stop.
make[1]: stopped in /usr/pkgsrc/math/py-xgboost
*** Error code 1
Stop.
make: stopped in /usr/pkgsrc/math/py-xgboost