=> Bootstrap dependency digest>=20211023: found digest-20220214
=> Checksum BLAKE2s OK for bowtie2-2.5.4.tar.gz
=> Checksum SHA512 OK for bowtie2-2.5.4.tar.gz
===> Installing dependencies for bowtie2-2.5.4
==========================================================================
The following variables will affect the build process of this package,
bowtie2-2.5.4.  Their current value is shown below:

        * PYTHON_VERSION_DEFAULT = 312

Based on these variables, the following variables have been set:

        * PYPACKAGE = python312

You may want to abort the process now with CTRL-C and change the value
of variables in the first group before continuing.  Be sure to run
`/usr/bin/make clean' after the changes.
==========================================================================
=> Tool dependency mktools-[0-9]*: found mktools-20220614
=> Tool dependency gmake>=3.81: found gmake-4.4.1
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Build dependency simde>=0.7.2: found simde-0.8.2
=> Full dependency perl>=5.0: found perl-5.38.2
=> Full dependency python312>=3.12.0: found python312-3.12.6
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Overriding tools for bowtie2-2.5.4
===> Extracting for bowtie2-2.5.4
===> Patching for bowtie2-2.5.4
=> Applying pkgsrc patches for bowtie2-2.5.4
**************************************
Ignoring patch file /usr/pkgsrc/biology/bowtie2/patches/patch-Makefile: invalid checksum
**************************************
**************************************
Ignoring patch file /usr/pkgsrc/biology/bowtie2/patches/patch-scripts_bowtie2-hbb.sh: invalid checksum
**************************************
ERROR: Patching failed due to modified or broken patch file(s):
ERROR: 	/usr/pkgsrc/biology/bowtie2/patches/patch-Makefile
ERROR: 	/usr/pkgsrc/biology/bowtie2/patches/patch-scripts_bowtie2-hbb.sh
*** Error code 1

Stop.
make[1]: stopped in /usr/pkgsrc/biology/bowtie2
*** Error code 1

Stop.
make: stopped in /usr/pkgsrc/biology/bowtie2