=> Bootstrap dependency digest>=20211023: found digest-20220214 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Building for py39-scipy-1.13.0 * Building wheel... + meson setup /pbulk/work/math/py-scipy/work/scipy-1.13.0 /pbulk/work/math/py-scipy/work/scipy-1.13.0/.mesonpy-ks49c01e -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md -Dblas=blas -Dlapack=lapack --native-file=/pbulk/work/math/py-scipy/work/scipy-1.13.0/.mesonpy-ks49c01e/meson-python-native-file.ini The Meson build system Version: 1.4.1 Source dir: /pbulk/work/math/py-scipy/work/scipy-1.13.0 Build dir: /pbulk/work/math/py-scipy/work/scipy-1.13.0/.mesonpy-ks49c01e Build type: native build Project name: scipy Project version: 1.13.0 C compiler for the host machine: gcc (gcc 8.5.0 "gcc (GCC) 8.5.0") C linker for the host machine: gcc ld.bfd 2.31.1 C++ compiler for the host machine: c++ (gcc 8.5.0 "g++ (GCC) 8.5.0") C++ linker for the host machine: c++ ld.bfd 2.31.1 Cython compiler for the host machine: cython-3.9 (cython 3.0.10) Host machine cpu family: x86_64 Host machine cpu: x86_64 Program python found: YES (/usr/pkg/bin/python3.9) Found pkg-config: YES (/pbulk/work/math/py-scipy/work/.tools/bin/pkg-config) 2.2.0 Run-time dependency python found: YES 3.9 Program cython-3.9 found: YES (/usr/pkg/bin/cython-3.9) Compiler for C supports arguments -Wno-unused-but-set-variable: YES Compiler for C supports arguments -Wno-unused-function: YES Compiler for C supports arguments -Wno-conversion: YES Compiler for C supports arguments -Wno-misleading-indentation: YES Library m found: YES Fortran compiler for the host machine: gfortran (gcc 8.5.0 "GNU Fortran (GCC) 8.5.0") Fortran linker for the host machine: gfortran ld.bfd 2.31.1 Compiler for Fortran supports arguments -Wno-conversion: YES Checking if "-Wl,--version-script" : links: YES Program tools/generate_f2pymod.py found: YES (/usr/pkg/bin/python3.11 /pbulk/work/math/py-scipy/work/scipy-1.13.0/tools/generate_f2pymod.py) Program scipy/_build_utils/tempita.py found: YES (/usr/pkg/bin/python3.11 /pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py) Program pythran-3.9 found: YES 0.16.1 0.16.1 (/usr/pkg/bin/pythran-3.9) Did not find CMake 'cmake' Found CMake: NO Run-time dependency xsimd found: NO (tried pkgconfig and cmake) Run-time dependency threads found: YES Library npymath found: YES Library npyrandom found: YES pybind11-config found: YES (/pbulk/work/math/py-scipy/work/.buildlink/bin/pybind11-config) 2.12.0 Run-time dependency pybind11 found: YES 2.12.0 Run-time dependency blas found: YES 3.12.0 Run-time dependency cblas found: YES 3.12.0 Run-time dependency lapack found: YES 3.12.0 Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-result: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Compiler for Fortran supports arguments -Wno-argument-mismatch: YES Compiler for Fortran supports arguments -Wno-conversion: YES (cached) Compiler for Fortran supports arguments -Wno-intrinsic-shadow: YES Compiler for Fortran supports arguments -Wno-maybe-uninitialized: YES Compiler for Fortran supports arguments -Wno-surprising: YES Compiler for Fortran supports arguments -Wno-uninitialized: YES Compiler for Fortran supports arguments -Wno-unused-dummy-argument: YES Compiler for Fortran supports arguments -Wno-unused-label: YES Compiler for Fortran supports arguments -Wno-unused-variable: YES Compiler for Fortran supports arguments -Wno-tabs: YES Compiler for Fortran supports arguments -Wno-argument-mismatch: YES (cached) Compiler for Fortran supports arguments -Wno-conversion: YES (cached) Compiler for Fortran supports arguments -Wno-maybe-uninitialized: YES (cached) Compiler for Fortran supports arguments -Wno-unused-dummy-argument: YES (cached) Compiler for Fortran supports arguments -Wno-unused-label: YES (cached) Compiler for Fortran supports arguments -Wno-unused-variable: YES (cached) Compiler for Fortran supports arguments -Wno-tabs: YES (cached) Checking if "Check atomic builtins without -latomic" : links: YES Configuring __config__.py using configuration Checking for function "open_memstream" : YES Configuring messagestream_config.h using configuration Compiler for Fortran supports arguments -w: YES Checking for size of "void*" : 8 Compiler for Fortran supports arguments -w: YES (cached) Build targets in project: 234 scipy 1.13.0 User defined options Native files: /pbulk/work/math/py-scipy/work/scipy-1.13.0/.mesonpy-ks49c01e/meson-python-native-file.ini buildtype : release b_ndebug : if-release b_vscrt : md blas : blas lapack : lapack Found ninja-1.12.1 at /usr/pkg/bin/ninja + /usr/pkg/bin/ninja -j8 [1/1475] Copying file scipy/stats/__init__.py [2/1475] Copying file scipy/stats/_biasedurn.pxd [3/1475] Generating scipy/linalg/cython_linalg with a custom command (wrapped by meson to set env) [4/1475] Copying file scipy/stats/templated_pyufunc.pxd [5/1475] Copying file scipy/stats/_stats.pxd [6/1475] Module scanner. [7/1475] Generating scipy/special/cython_special with a custom command [8/1475] Module scanner. [9/1475] Module scanner. [10/1475] Module scanner. [11/1475] Module scanner. [12/1475] Module scanner. [13/1475] Copying file scipy/optimize/cython_optimize/__init__.py [14/1475] Module scanner. [15/1475] Module scanner. [16/1475] Generating scipy/stats/_stats_gen_pyx with a custom command [17/1475] Copying file scipy/__init__.py [18/1475] Module scanner. [19/1475] Copying file scipy/linalg.pxd [20/1475] Module scanner. [21/1475] Copying file scipy/optimize.pxd [22/1475] Copying file scipy/special.pxd [23/1475] Copying file scipy/_lib/_ccallback_c.pxd [24/1475] Copying file scipy/_lib/ccallback.pxd [25/1475] Copying file scipy/special/_agm.pxd [26/1475] Copying file scipy/special/__init__.py [27/1475] Copying file scipy/_lib/__init__.py [28/1475] Copying file scipy/special/_boxcox.pxd [29/1475] Copying file scipy/_lib/messagestream.pxd [30/1475] Copying file scipy/special/_cdflib_wrappers.pxd [31/1475] Copying file scipy/special/_cdflib.pxd [32/1475] Copying file scipy/special/_cephes.pxd [33/1475] Copying file scipy/special/_complexstuff.pxd [34/1475] Copying file scipy/special/_digamma.pxd [35/1475] Copying file scipy/special/_cunity.pxd [36/1475] Copying file scipy/special/_ellip_harm.pxd [37/1475] Copying file scipy/special/_ellipk.pxd [38/1475] Compiling C object scipy/libdummy_g77_abi_wrappers.a.p/_build_utils_src_wrap_dummy_g77_abi.c.o [39/1475] Copying file scipy/special/_ellip_harm_2.pxd [40/1475] Copying file scipy/special/_convex_analysis.pxd [41/1475] Copying file scipy/special/_exprel.pxd [42/1475] Copying file scipy/special/_factorial.pxd [43/1475] Copying file scipy/special/_hypergeometric.pxd [44/1475] Copying file scipy/special/_spence.pxd [45/1475] Copying file scipy/special/_hyp0f1.pxd [46/1475] Copying file scipy/special/_ndtri_exp.pxd [47/1475] Copying file scipy/special/_legacy.pxd [48/1475] Copying file scipy/special/_spherical_bessel.pxd [49/1475] Copying file scipy/special/_trig.pxd [50/1475] Copying file scipy/special/_sici.pxd [51/1475] Copying file scipy/special/orthogonal_eval.pxd [52/1475] Copying file scipy/special/_xlogy.pxd [53/1475] Copying file scipy/special/_wright_bessel.pxd [54/1475] Copying file scipy/special/sph_harm.pxd [55/1475] Copying file scipy/special/sf_error.pxd [56/1475] Generating scipy/special/_dummy_cython_special.pxd with a custom command [57/1475] Copying file scipy/special/_ufuncs_extra_code_common.pxi [58/1475] Copying file scipy/special/_cython_special_custom.pxi [59/1475] Copying file scipy/special/_ufuncs_extra_code.pxi [60/1475] Copying file scipy/special/_hyp2f1.pxd [61/1475] Generating scipy/linalg/_dummy_cython_blas.pxd with a custom command [62/1475] Compiling C object scipy/lib_fortranobject.a.p/df29252f6a5a6ee487d4f6611ee6f679ac10ebe9_site-packages_numpy_f2py_src_fortranobject.c.o [63/1475] Generating scipy/linalg/_decomp_update with a custom command FAILED: scipy/linalg/_decomp_update.pyx /usr/pkg/bin/python3.11 /pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py ../scipy/linalg/_decomp_update.pyx.in -o scipy/linalg Traceback (most recent call last): File "/pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py", line 6, in from Cython import Tempita as tempita ModuleNotFoundError: No module named 'Cython' [64/1475] Generating scipy/linalg/_matfuncs_expm with a custom command FAILED: scipy/linalg/_matfuncs_expm.pyx /usr/pkg/bin/python3.11 /pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py ../scipy/linalg/_matfuncs_expm.pyx.in -o scipy/linalg Traceback (most recent call last): File "/pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py", line 6, in from Cython import Tempita as tempita ModuleNotFoundError: No module named 'Cython' [65/1475] Generating scipy/sparse/_csparsetools_pyx with a custom command FAILED: scipy/sparse/_csparsetools.pyx /usr/pkg/bin/python3.11 /pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py ../scipy/sparse/_csparsetools.pyx.in -o scipy/sparse Traceback (most recent call last): File "/pbulk/work/math/py-scipy/work/scipy-1.13.0/scipy/_build_utils/tempita.py", line 6, in from Cython import Tempita as tempita ModuleNotFoundError: No module named 'Cython' [66/1475] Copying file scipy/special/_cython_special.pxi [67/1475] Copying file scipy/linalg/__init__.py [68/1475] Generating scipy/linalg/interpolative_module with a custom command FAILED: scipy/linalg/_interpolativemodule.c /usr/pkg/bin/python3.11 /pbulk/work/math/py-scipy/work/scipy-1.13.0/tools/generate_f2pymod.py ../scipy/linalg/interpolative.pyf -o scipy/linalg Traceback (most recent call last): File "/pbulk/work/math/py-scipy/work/scipy-1.13.0/tools/generate_f2pymod.py", line 299, in main() File "/pbulk/work/math/py-scipy/work/scipy-1.13.0/tools/generate_f2pymod.py", line 293, in main raise RuntimeError(f"Writing {args.outfile} with f2py failed!\n" ^^^^^^^^^^^^ AttributeError: 'Namespace' object has no attribute 'outfile' [69/1475] Copying file scipy/sparse/csgraph/parameters.pxi [70/1475] Copying file scipy/linalg/_cythonized_array_utils.pxd ninja: build stopped: subcommand failed. ERROR Backend subprocess exited when trying to invoke build_wheel *** Error code 1 Stop. make[1]: stopped in /usr/pkgsrc/math/py-scipy *** Error code 1 Stop. make: stopped in /usr/pkgsrc/math/py-scipy